BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G10SP1|AL428788
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1516 1396 0.0
>3x_Contig1516
Length = 8750
Score = 1396 bits (704), Expect = 0.0
Identities = 704/704 (100%)
Strand = Plus / Minus
Query: 146 agaaggatgtctgttttgaagctattgaaccctgtgcgagtgcgaggatttgcttcttgt 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8750 agaaggatgtctgttttgaagctattgaaccctgtgcgagtgcgaggatttgcttcttgt 8691
Query: 206 gccaggttgtaccaatcagaactgtcatcattgaaagaatataagaataccatcagtaca 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8690 gccaggttgtaccaatcagaactgtcatcattgaaagaatataagaataccatcagtaca 8631
Query: 266 ctgttaaagaaccctgcacatgaactaacaagccccaatttagttgcactccattccaga 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8630 ctgttaaagaaccctgcacatgaactaacaagccccaatttagttgcactccattccaga 8571
Query: 326 ttaagattgcctcaaggcttatcctattctcttttgtccagatgtttgacgtgtcgttct 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8570 ttaagattgcctcaaggcttatcctattctcttttgtccagatgtttgacgtgtcgttct 8511
Query: 386 agtggggaagtgaactatgacaatgtcagtttgaacatttttggtaagagtcttttaact 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8510 agtggggaagtgaactatgacaatgtcagtttgaacatttttggtaagagtcttttaact 8451
Query: 446 ttggcagttacatccgagctaatgaaaaaatatcctaggctaccgggtgtggttttgaat 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8450 ttggcagttacatccgagctaatgaaaaaatatcctaggctaccgggtgtggttttgaat 8391
Query: 506 gctgctgtggatgcatatattaacgaccatgttttgagcaatgtcggtcgttcctggggt 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8390 gctgctgtggatgcatatattaacgaccatgttttgagcaatgtcggtcgttcctggggt 8331
Query: 566 atagaaccggaaactcaaagtgtagtggatagatatgcaaagaaagaaaatgttaccatt 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8330 atagaaccggaaactcaaagtgtagtggatagatatgcaaagaaagaaaatgttaccatt 8271
Query: 626 acattgggtaaactacgttatttccaaaattccgtagatgaattgcataacttcactgag 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8270 acattgggtaaactacgttatttccaaaattccgtagatgaattgcataacttcactgag 8211
Query: 686 aacaatgctatggcagttgccgtaaggagtatattcgccgctgtatacagtgtcgacaaa 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8210 aacaatgctatggcagttgccgtaaggagtatattcgccgctgtatacagtgtcgacaaa 8151
Query: 746 gatttcaaccagacacataagtttatcgcagatcatattttgtccagaaagctggacgtt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8150 gatttcaaccagacacataagtttatcgcagatcatattttgtccagaaagctggacgtt 8091
Query: 806 aaagatttgttcgcgttcgaacaaccaaccagagaactggcagc 849
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8090 aaagatttgttcgcgttcgaacaaccaaccagagaactggcagc 8047
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7059
Number of Sequences: 1807
Number of extensions: 7059
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)